Package: pvclust 2.2-0
pvclust: Hierarchical Clustering with P-Values via Multiscale Bootstrap Resampling
An implementation of multiscale bootstrap resampling for assessing the uncertainty in hierarchical cluster analysis. It provides SI (selective inference) p-value, AU (approximately unbiased) p-value and BP (bootstrap probability) value for each cluster in a dendrogram.
Authors:
pvclust_2.2-0.tar.gz
pvclust_2.2-0.zip(r-4.7)pvclust_2.2-0.zip(r-4.6)pvclust_2.2-0.zip(r-4.5)
pvclust_2.2-0.tgz(r-4.6-any)pvclust_2.2-0.tgz(r-4.5-any)
pvclust_2.2-0.tar.gz(r-4.7-any)pvclust_2.2-0.tar.gz(r-4.6-any)
pvclust_2.2-0.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION
card.svg |card.png
pvclust/json (API)
| # Install 'pvclust' in R: |
| install.packages('pvclust', repos = c('https://r-suzuki.r-universe.dev', 'https://cloud.r-project.org')) |
- lung - DNA Microarray Data of Lung Tumors
This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.
Last updated from:ae5dc30851. Checks:9 OK. Indexed: yes.
| Target | Result | Time | Files | Syslog |
|---|---|---|---|---|
| linux-devel-x86_64 | OK | 93 | ||
| source / vignettes | OK | 142 | ||
| linux-release-x86_64 | OK | 104 | ||
| macos-release-arm64 | OK | 74 | ||
| macos-oldrel-arm64 | OK | 91 | ||
| windows-devel | OK | 64 | ||
| windows-release | OK | 65 | ||
| windows-oldrel | OK | 66 | ||
| wasm-release | OK | 104 |
Exports:msfitmsplotparPvclustpvclustpvpickpvrectseplot
Dependencies:
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| DNA Microarray Data of Lung Tumors | lung |
| Curve Fitting for Multiscale Bootstrap Resampling | lines.msfit msfit plot.msfit summary.msfit |
| Drawing the Results of Curve Fitting for Pvclust Object | msplot |
| Draws Dendrogram with P-values for Pvclust Object | plot.pvclust text.pvclust |
| Print Function for Pvclust Object | print.pvclust |
| Calculating P-values for Hierchical Clustering | parPvclust pvclust |
| Find Clusters with High/Low P-values | lines.pvclust pvpick pvrect |
| Diagnostic Plot for Standard Error of p-value | seplot |
